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Research
OmicsVolcano: software for intuitive visualization and interactive exploration of high-throughput biological dataAdvances in omics technologies have generated exponentially larger volumes of biological data; however, their analyses and interpretation are limited to computationally proficient scientists. We created OmicsVolcano, an interactive open-source software tool to enable visualization and exploration of high-throughput biological data, while highlighting features of interest using a volcano plot interface. In contrast to existing tools, our software and user-interface design allow it to be used without requiring any programming skills to generate high-quality and presentation-ready images.
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Pseudomonas aeruginosa Resistance to Bacteriophages and Its Prevention by Strategic Therapeutic Cocktail FormulationAntimicrobial resistance poses a significant threat to modern healthcare as it limits treatment options for bacterial infections, particularly impacting those with chronic conditions such as cystic fibrosis (CF). Viscous mucus accumulation in the lungs of individuals genetically predisposed to CF leads to recurrent bacterial infections, necessitating prolonged antimicrobial chemotherapy. Pseudomonas aeruginosa infections are the predominant driver of CF lung disease, and airway isolates are frequently resistant to multiple antimicrobials.
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Barriers and Considerations for Diagnosing Rare Diseases in Indigenous PopulationsAdvances in omics and specifically genomic technologies are increasingly transforming rare disease diagnosis. However, the benefits of these advances are disproportionately experienced within and between populations, with Indigenous populations frequently experiencing diagnostic and therapeutic inequities. The International Rare Disease Research Consortium (IRDiRC) multi-stakeholder partnership has been advancing toward the vision of all people living with a rare disease receiving an accurate diagnosis, care, and available therapy within 1 year of coming to medical attention. In order to further progress toward this vision, IRDiRC has created a taskforce to explore the access barriers to diagnosis of rare genetic diseases faced by Indigenous peoples, with a view of developing recommendations to overcome them.
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Harnessing the potential of modern omics approaches to study plant biotic and abiotic stressesThe growing food demands and increasing urbanization are putting pressure to obtain more crop productivity from the shrinking piece of land. Climate change is further complicating the food chain by putting a negative impact on crop productivity by giving rise to multiple biotic and abiotic stresses.
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Assessing the impact of the 13 valent pneumococcal vaccine on childhood empyema in AustraliaEmpyema is a serious complication of pneumonia frequently caused by Streptococcus pneumoniae (SP). We assessed the impact of the 13-valent pneumococcal conjugate vaccine (13vPCV) on childhood pneumonia and empyema after inclusion in the Australian National Immunisation Program.
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Poverty, Parental Mental Health and Child/Adolescent Mental Disorders: Findings from a National Australian SurveyThe purpose of this study is to examine the association between poverty and child mental disorders
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Risk factors for symptomatic venous thromboembolism during therapy for childhood acute lymphoblastic leukemiaWe found two known risk factors in a large cohort of children treated for ALL and identified other factors associated with venous thromboembolism
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The Nature and Quality of Australian Supermarkets' Policies that can Impact Public Health Nutrition, and Evidence of their Practical Application: A Cross-Sectional StudyFindings suggest Australian supermarket CSR policies are not likely to adequately contribute to improving population diets or sustainability of food systems
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Developmental vulnerabilities in children of chronically ill parents: A population-based linked data studyMaternal chronic illness is associated with an increased risk of poor developmental outcomes for children, particularly daughters
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Validity of the Middle Years Development Instrument for Population Monitoring of Student Wellbeing in Australian School ChildrenThis paper reports on a five-year project to measure student wellbeing across an education system using the Middle Years Development Instrument